API Reference

Welcome to mdciao! Below you will find the submodules exposed by the API

contacts	Computation, bookkeeping, and manipulation of residue-residue contacts.
fragments	Guess and manipulate fragments, i.e., sub-regions of molecular topologies.
nomenclature	Get and manipulate consensus nomenclature for GPCRs, G-proteins, and Kinases.
sites	Tools for reading and manipulating sites.
cli	Programatic access to the CLI methods
plots	Plotting functions
utils	Container for other sub-modules with lower-level functions.
flare	Produce flare-plots, where the residues are drawn on a circle and connected with lines of varying opacity.
pdb	RCSB-PDB web lookups
examples	Helper functions for demos and data download